Commander Berkley Levine is content with her life as a Top Gun instructor in Fallon, Nevada, flying F-18s for the Navy and trying to get over the death of her sister. A change of government and a new equality initiative places Captain Aidan Sullivan at the helm of the Navy's newest carrier, the USS Jefferson. Her first mission could have serious international consequences if she fails. Aidan's orders are to destroy two sites housing the nuclear program of an unfriendly nation, and she can think of only one person she trusts enough to get the job done: her old lover Berkley.

Blue Skies will take you from Fallon, Nevada, to the Sea of Japan and beyond, as Berkley leads an elite group of pilots over enemy territory. As they embark on this adventure, Berkley and Aidan try to rediscover what they gave up for family, duty, and country.